Normal anti-viruses are not anti spyware programs even though they say they are, I would say use spybot S&D 2.0(beta) or malwarebytes then use combofix this 2 step fix gets rid of 99% of issues.
This is more of a virus as it likes to close everything now and again and ask me for money plus it came with several trojans. I think I got rid of it though as it downloaded like a normal program so control panel delete and I have had no problems yet ie closing programs, it telling me im full of viruses etc.
Or is it possibly still there?
It's still there. You should have been removing it in safemode.
Really? Im not having any trouble off it and the malwarebytes thingy is scanning now so surely that will clean it no?
You should have been following Nick's guild that he posted. That'll completely remove it. What you did more than likely only removed bits and pieces of it.