Needleman - Wunsch algorithm

[WanganDreams]

Hey everybody,

I'm looking for an implementation of Needleman-Wunsch algorithm written in Java. I've tried looking for it on google and other places, with no luck. If anybody knows where I can take a look at one, I would greatly appreciate it.

Thanks in advance.

-Spets

 

[skip0110]

It would help if you described what this algorithm does, to jog my memory. Try www.nr.com though.

 

[WanganDreams]

Originally posted by skip0110
It would help if you described what this algorithm does, to jog my memory. Try www.nr.com though.

Needleman - Wunsch gives you global alignment between two sequences of DNA, mRNA, or protein. Smith - Waterman does local alignment.

Thanks for your suggestion, I'll take a look at it right away.

-Spets